The detailed information of tRNA gene sequence


Sequence ID>WENV170685526
Genome IDLFRM01096931
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 3148
End posion on genome 3072
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gtcaccacgc
tRNA gene sequence 
GGCCCGGTAGTTCAGTTGGTTAGAACGCTAGCCTGTCACGCTAGAGGCCGAGGGTTCAAG
TCCCTTCCGGGTCGCCA
Downstream region at tRNA end position 
ttttttgctg
Secondary structure (Cloverleaf model)
>WENV170685526	Asp	GTC
                   c      GCCA ttttttgctg
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     T T C C C     A
      T G A        A      + | | | |     A
    T       C T T G       G A G G G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGCC
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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