The detailed information of tRNA gene sequence


Sequence ID>WENV170685527
Genome IDLFRM01096931
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 3065
End posion on genome 2990
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gccatttttt
tRNA gene sequence 
GCTGGCGTAGCTCAACTGGCAGAGCAGCTGACTTGTAATCAGCAGGTTGCGGGTTCGAGT
CCCATCGCCAGCTCCA
Downstream region at tRNA end position 
tcgtttaagc
Secondary structure (Cloverleaf model)
>WENV170685527	Thr	TGT
                   t      TCCA tcgtttaagc
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T A C C C     A
      C A A        A      +   | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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