The detailed information of tRNA gene sequence


Sequence ID>WENV170685530
Genome IDLFRM01096943
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1082
End posion on genome 1156
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
tctccacctc
tRNA gene sequence 
GGGCGGTTGGCGCAGTGGTAGCGCGCTTCCTTGACACGGAAGAGGTCGCCAGTTCAAACC
TGGCATCGCCCACCG
Downstream region at tRNA end position 
agaagaagca
Secondary structure (Cloverleaf model)
>WENV170685530	Val	GAC
                   c      ACCG agaagaagca
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G + T
                     T - A          C A
                    T     C G G T C     A
        G A        G      | | | | |     A
      T     C G C G       G C C A G     C
      G     | | | |                 T T
      G     G C G C
        T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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