The detailed information of tRNA gene sequence


Sequence ID>WENV170685546
Genome IDLFRM01097365
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 178
End posion on genome 102
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cataaaaatt
tRNA gene sequence 
GGCCCAGTAGTTCAGACGGTTAGAACGCTAGCCTGTCACGCTAGAGGCAGAGGGTTCGAG
TCCCTTCTGGGTCGCCA
Downstream region at tRNA end position 
attacaaaat
Secondary structure (Cloverleaf model)
>WENV170685546	Asp	GTC
                   t      GCCA attacaaaat
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     T T C C C     A
      A G A        A      + | | | |     G
    C       C T T G       G A G G G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGCA
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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