The detailed information of tRNA gene sequence


Sequence ID>WENV170685555
Genome IDLFRM01097963
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 460
End posion on genome 385
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
gatgacgaaa
tRNA gene sequence 
GCGCCATTAGCTCAATTGGTAGAGCATCTGACTCTTAATCAGAGGGTTCGGGGTTCGATT
CCCTGATGGCGCACAA
Downstream region at tRNA end position 
taagaccagg
Secondary structure (Cloverleaf model)
>WENV170685555	Lys	CTT
                   a      ACAA taagaccagg
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     A - T
                     T - A          T T
                    T     G T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTT
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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