The detailed information of tRNA gene sequence


Sequence ID>WENV170685564
Genome IDLFRM01098435
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 611
End posion on genome 697
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ggttcggctg
tRNA gene sequence 
GGAGGATTCGACTAGCGGCCTATGTCACACGCCTGGAACGCGTGCGGGTAGCAATACCCT
CGTGGGTTCAAATCCCACATCCTCCGCag
Downstream region at tRNA end position 
atgactttca
Secondary structure (Cloverleaf model)
>WENV170685564	Ser	GGA
                   g      GCag atgactttca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     C A C C C     A
      C G A        C      | | | | |     A
    G       T C A G       G T G G G     C
    G         | | |                 T T
    C       T G T C
      C T A        A     CGGGTAGCAATACCCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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