The detailed information of tRNA gene sequence


Sequence ID>WENV170685567
Genome IDLFRM01098648
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 12811
End posion on genome 12737
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
gaccaaatat
tRNA gene sequence 
GCGGAAGTGGCTCAGGGGTAGAGCATCGCCTTGCCAAGGCGGGGGTCGCGAGTTCGAATC
TCGTCTTCCGCTCCA
Downstream region at tRNA end position 
attttgcgga
Secondary structure (Cloverleaf model)
>WENV170685567	Gly	GCC
                   t      TCCA attttgcgga
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     T G C T C     A
        G A        G      + | | | |     G
      G     C T C G       G C G A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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