The detailed information of tRNA gene sequence


Sequence ID>WENV170685577
Genome IDLFRM01098648
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 11866
End posion on genome 11790
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tattagacgt
tRNA gene sequence 
GGGCCATTAGCTCAGTTGGTCAGAGCGTCCGGCTCATAACCGGCAGGTCCTGGGTTCAAG
TCCCCGATGGCCCACCA
Downstream region at tRNA end position 
atttaataaa
Secondary structure (Cloverleaf model)
>WENV170685577	Met	CAT
                   t      ACCA atttaataaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     T - A          T G
                    T     G C C C C     A
      T G A        A      |   | | |     A
    T       C T C G       C T G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     AGGTC
                    T   C
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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