The detailed information of tRNA gene sequence


Sequence ID>WENV170685587
Genome IDLFRM01099307
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 21519
End posion on genome 21592
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
gacctcggac
tRNA gene sequence 
GCCGCAGTAACTCAGTTGGGAGAGTGCAAGACTGAAGATCTTGAAGTCGCTGGTTCGAGC
CCGGCCTGCGGCACtc
Downstream region at tRNA end position 
taatcatcct
Secondary structure (Cloverleaf model)
>WENV170685587	Phe	GAA
                   c      ACtc taatcatcct
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     A - T
                     G - C          C G
                    T     C G G C C     A
      T G A        A      | | + | |     G
    T       C T C A       G C T G G     C
    G       | | | |                 T T
    G       G A G T
      G A          G     AAGTC
                    C - G
                    A - T
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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