The detailed information of tRNA gene sequence


Sequence ID>WENV170685588
Genome IDLFRM01099369
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 6922
End posion on genome 6846
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
caaaaccaat
tRNA gene sequence 
GGTGTGGTAGTTCAGTTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAG
TCCCGTCCATACCGCAA
Downstream region at tRNA end position 
aaaaaaagag
Secondary structure (Cloverleaf model)
>WENV170685588	Asp	GTC
                   t      GCAA aaaaaaagag
                     G - C
                     G - C
                     T - A
                     G + T
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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