The detailed information of tRNA gene sequence


Sequence ID>WENV170685624
Genome IDLFRM01102032
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 4289
End posion on genome 4216
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
taacacacaG
tRNA gene sequence 
GCCAAGGTGGCGGAGCGGCTACGCGGTTGACTGCAGATCAACTACACCCCGGTTCAAGTC
CGGGCCTTGGCTTtc
Downstream region at tRNA end position 
agcagtttgg
Secondary structure (Cloverleaf model)
>WENV170685624	Cys	GCA
                   G      TTtc agcagtttgg
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          T G
                    T     G G G C C     A
        G A        G      | | | | |     A
      C     G G C G       C C C G G     C
      G       | | |                 T T
      G     A C G C
        C T        G     TACAC
                    G - C
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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