The detailed information of tRNA gene sequence


Sequence ID>WENV170685652
Genome IDLFRM01103005
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 888
End posion on genome 814
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tacgagccaa
tRNA gene sequence 
GGGCGGATAGCTCAGCGGAAGAGCACCTGCCTTACACGCAGGGGGTCATAGGTTCGAACC
CTATTCCGCCCACCA
Downstream region at tRNA end position 
tgaagtagtt
Secondary structure (Cloverleaf model)
>WENV170685652	Val	TAC
                   a      ACCA tgaagtagtt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T          C A
                    T     T A T C C     A
        G A        A      | | | | |     G
      C     C T C G       A T A G G     C
      G     | | | |                 T T
      G     G A G C
        A A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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