The detailed information of tRNA gene sequence


Sequence ID>WENV170685671
Genome IDLFRM01103315
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 940
End posion on genome 866
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
taaggcaatt
tRNA gene sequence 
GCCGCTGTGGCTTAGTGGTATAGCGGCTGATTCGTAATCAGCAGGTCGGGGGTTCAAATC
CCTCCAGCGGCTCTA
Downstream region at tRNA end position 
ttaccgggcg
Secondary structure (Cloverleaf model)
>WENV170685671	Thr	CGT
                   t      TCTA ttaccgggcg
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     C T C C C     A
        G A        G      | + | | |     A
      T     T T C G       G G G G G     C
      G       | | |                 T T
      G     T A G C
        T A        G     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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