The detailed information of tRNA gene sequence


Sequence ID>WENV170685701
Genome IDLFRM01104989
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 63037
End posion on genome 63114
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
agaagtacaa
tRNA gene sequence 
GGGCCCGTAGCTTAGCCTGGCTGGAGCGCCCGGCTGATAACCGGGAGGCCATGAGTTCAA
ATCTCATCGGGCCCACTA
Downstream region at tRNA end position 
tcaccttctg
Secondary structure (Cloverleaf model)
>WENV170685701	Ile	GAT
                   a      ACTA tcaccttctg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T A C T C     A
    C C G A        A      | | | | |     A
  T         T T C G       A T G A G     C
  G         + | | |                 T T
  G         G A G C
    C T G          G     AGGCC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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