The detailed information of tRNA gene sequence


Sequence ID>WENV170685702
Genome IDLFRM01104989
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 57112
End posion on genome 57024
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gccgccataa
tRNA gene sequence 
GCCGAGGTAGCAAAGCCCGGATCACCGCGCCAGCCTTGAGAGCTGGTGTCCGCAAGGACT
CGGGAGTTCGAATCTCCCCCTCGGCGCCT
Downstream region at tRNA end position 
catacttcct
Secondary structure (Cloverleaf model)
>WENV170685702	Ser	TGA
                   a      GCCT catacttcct
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
    C C G A        A      | | | | |     G
  C         A A C G       G G G A G     C
  G             | |                 T T
  G         C C G C
    A T C A        G     TGTCCGCAAGGACTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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