The detailed information of tRNA gene sequence


Sequence ID>WENV170685703
Genome IDLFRM01104989
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 16395
End posion on genome 16322
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
cgattcgcaa
tRNA gene sequence 
GGGCAGATAGATCAGCTGGAAGATCGCGACATTCGCAATGTCGAGGCCGCGGGTTCAAAT
CCCGCTCTGTCCACtc
Downstream region at tRNA end position 
aaactctggc
Secondary structure (Cloverleaf model)
>WENV170685703	Ala	CGC
                   a      ACtc aaactctggc
                     G - C
                     G - C
                     G + T
                     C - G
                     A - T
                     G - C
                     A - T          T A
                    T     C G C C C     A
      C G A        A      | | | | |     A
    T       C T A G       G C G G G     C
    G       | | | |                 T T
    G       G A T C
      A A          G     AGGCC
                    C - G
                    G - C
                    A - T
                    C - G
                    A - T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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