The detailed information of tRNA gene sequence


Sequence ID>WENV170685729
Genome IDLFRM01106527
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 566
End posion on genome 641
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gaaaatttca
tRNA gene sequence 
GGGGCTATAGCTCAGCTGGGAGAGCGCTTGAATGGCATTCAAGAGGTCAGCGGTTCGATC
CCGCTTAGCTCCACCA
Downstream region at tRNA end position 
ttttgnnnnn
Secondary structure (Cloverleaf model)
>WENV170685729	Ala	GGC
                   a      ACCA ttttgnnnnn
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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