The detailed information of tRNA gene sequence


Sequence ID>WENV170685733
Genome IDLFRM01106591
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1353
End posion on genome 1424
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
ggttcgcaac
tRNA gene sequence 
GCGGGCGTAGCTCAATGGTAGAGCGTCAGCTTCCCAAGCTGAACACGCGGGTTCGATTCC
CGTCGCCCGCTCtc
Downstream region at tRNA end position 
tttgtgccct
Secondary structure (Cloverleaf model)
>WENV170685733	Gly	CCC
                   c      TCtc tttgtgccct
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T T
                    T     T G C C C     A
        A A        A      + | | | |     G
      T     C T C G       G C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     ACAC
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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