The detailed information of tRNA gene sequence


Sequence ID>WENV170685760
Genome IDLFRM01107683
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1151
End posion on genome 1076
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
aaaattgatt
tRNA gene sequence 
GGGGGCATAGCTCAGCTGGGAGAGCGCTTGAATCGCACTCAAGAGGTCGGGGGTTCGAGT
CCCCTTGTCTCCACCA
Downstream region at tRNA end position 
tttgaaaacg
Secondary structure (Cloverleaf model)
>WENV170685760	Ala	CGC
                   t      ACCA tttgaaaacg
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     C - G
                     A - T          T G
                    T     T C C C C     A
      C G A        A      + | | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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