The detailed information of tRNA gene sequence


Sequence ID>WENV170685840
Genome IDLFRM01111543
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 6659
End posion on genome 6584
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctttttacat
tRNA gene sequence 
AGGTCAGTAGCTCCAATGGTAGAGCATCGGATTCCAAATCCGAGTGATGGGGGTTCGAGT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
cttttgattt
Secondary structure (Cloverleaf model)
>WENV170685840	Trp	CCA
                   t      GCCA cttttgattt
                     A - T
                     G - C
                     G - C
                     T + G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      A A C        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGAT
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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