The detailed information of tRNA gene sequence


Sequence ID>WENV170685845
Genome IDLFRM01112042
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 12152
End posion on genome 12078
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
tataaagcga
tRNA gene sequence 
GCGGATGTAGCTCAGTGGTAGAGCATCGGCTTCCCAAGCCGAGAGTCGCGGGTTCGAATC
CCGTCATCCGCTCCA
Downstream region at tRNA end position 
tttttgtgta
Secondary structure (Cloverleaf model)
>WENV170685845	Gly	CCC
                   a      TCCA tttttgtgta
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T G C C C     A
        G A        A      + | | | |     G
      T     C T C G       G C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GAGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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