The detailed information of tRNA gene sequence


Sequence ID>WENV170685860
Genome IDLFRM01112816
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 104
End posion on genome 178
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
accaaaatat
tRNA gene sequence 
GCGGGTTTAACTCAGCGGTAGAGTGTCACCTTGCCAAGGTGAAAGTCGCGAGTTCAAATC
TCGTAACCCGCTCCA
Downstream region at tRNA end position 
ataaaaatgg
Secondary structure (Cloverleaf model)
>WENV170685860	Gly	GCC
                   t      TCCA ataaaaatgg
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A          T A
                    T     T G C T C     A
        G A        A      + | | | |     A
      C     C T C A       G C G A G     C
      G     | | | |                 T T
      G     G A G T
        T A        G     AAGTC
                    T - A
                    C - G
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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