The detailed information of tRNA gene sequence


Sequence ID>WENV170685861
Genome IDLFRM01112887
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2274
End posion on genome 2366
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnnnnnnnnc
tRNA gene sequence 
GGAGAGTTGCCCGAGTGGCTGAAGGGGCTCCCCTGCTAAGGGAGTATAGGGTTTATAGCT
CTATCGAGGGTTCGAATCCCTCACTCTCCGCCA
Downstream region at tRNA end position 
tcccccctgc
Secondary structure (Cloverleaf model)
>WENV170685861	Ser	GCT
                   c      GCCA tcccccctgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C C       G A G G G     C
    G         | | |                 T T
    C       A G G G
      T G A        G     TATAGGGTTTATAGCTCTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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