The detailed information of tRNA gene sequence


Sequence ID>WENV170685867
Genome IDLFRM01113103
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 197
End posion on genome 121
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
cacgccccac
tRNA gene sequence 
GCGCCCGTAGCTCAGCTGGATAGAGTACCTGGCTACGAACCAGGCGGTCGGAGGTTCGAA
TCCTTCCGGGCGCGCCA
Downstream region at tRNA end position 
ataccaaggg
Secondary structure (Cloverleaf model)
>WENV170685867	Arg	ACG
                   c      GCCA ataccaaggg
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C T T C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G A G G     C
    G       | | | +                 T T
    G       G A G T
      A T A        A     CGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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