The detailed information of tRNA gene sequence


Sequence ID>WENV170685872
Genome IDLFRM01113127
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 73740
End posion on genome 73666
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
cgcctgaaag
tRNA gene sequence 
GGGCCCGTAGCTCAGCTAGGTAGAGCAATCGGCTCTTAACCGATGGGTCGAGGGTTCGAA
TCCCTCCGGGCCCGCtc
Downstream region at tRNA end position 
cttttccatc
Secondary structure (Cloverleaf model)
>WENV170685872	Lys	CTT
                   g      GCtc cttttccatc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | | | | |     G
    T       C T C G       G A G G G     C
    A       | | | |                 T T
    G       G A G C
      G T A        A     GGGTC
                    A - T
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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