The detailed information of tRNA gene sequence


Sequence ID>WENV170685884
Genome IDLFRM01113997
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 505
End posion on genome 579
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tacctaggat
tRNA gene sequence 
GGGGCTGTAGCTCAGCGGGAGAGCACTTCCCTCGCACGGAAGGGGTCGGGCGTTCAAATC
GCCTCAGCTCCACCA
Downstream region at tRNA end position 
ttctaaaaaa
Secondary structure (Cloverleaf model)
>WENV170685884	Ala	CGC
                   t      ACCA ttctaaaaaa
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T C C G C     A
        G A        A      + | | | |     A
      C     C T C G       G G G C G     C
      G     | | | |                 T T
      G     G A G C
        G A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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