The detailed information of tRNA gene sequence


Sequence ID>WENV170685903
Genome IDLFRM01115276
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 13633
End posion on genome 13558
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
aatgcaatgt
tRNA gene sequence 
GGGCCATTAGCTCAGCTGGCAGAGCACCTGACTCTTAATCAGGGTGTCCGGGGTTCGAGT
CCCTGATGGCCCACCA
Downstream region at tRNA end position 
acaccaattt
Secondary structure (Cloverleaf model)
>WENV170685903	Lys	CTT
                   t      ACCA acaccaattt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     T - A          T G
                    T     G T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GTGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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