The detailed information of tRNA gene sequence


Sequence ID>WENV170685912
Genome IDLFRM01115407
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1467
End posion on genome 1543
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
tccggatctt
tRNA gene sequence 
GTGCCTGTAGCTCAGCTGGATAGAGTGTCAGCCTCCGGAGCTGAAGGTCTCGGGTTCGAA
TCCCGACAGGCACGCCA
Downstream region at tRNA end position 
tttgaataat
Secondary structure (Cloverleaf model)
>WENV170685912	Arg	CCG
                   t      GCCA tttgaataat
                     G - C
                     T - A
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     A G C C C     A
      C G A        A      | | | | |     G
    T       C T C G       T C G G G     C
    G       | | | +                 T T
    G       G A G T
      A T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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