The detailed information of tRNA gene sequence


Sequence ID>WENV170685914
Genome IDLFRM01115407
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 746
End posion on genome 654
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tatatttaac
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGTCGAAGGCGGGCGACTCGAAATCGTCTTGGCGGTGCTGAGCT
GTCACGTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tatttacagc
Secondary structure (Cloverleaf model)
>WENV170685914	Ser	CGA
                   c      GCCA tatttacagc
                     G - C
                     G - C
                     A - T
                     G - C
                     G + T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TTGGCGGTGCTGAGCTGTCAC
                    G - C
                    G + T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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