The detailed information of tRNA gene sequence


Sequence ID>WENV170685916
Genome IDLFRM01115473
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1087
End posion on genome 1161
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cacaccttcg
tRNA gene sequence 
GGCGGCATAGCCAAGTGGTAAGGCAGAGGTCTGCAAAACCTTTATTCTCCAGTTCAAATC
TGGATGCCGCCTCCA
Downstream region at tRNA end position 
atttattcca
Secondary structure (Cloverleaf model)
>WENV170685916	Cys	GCA
                   g      TCCA atttattcca
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     A G G T C     A
        G A        A      | | | | |     A
      T     A C C G       T C C A G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATTC
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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