The detailed information of tRNA gene sequence


Sequence ID>WENV170685959
Genome IDLFRM01117401
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 8720
End posion on genome 8632
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
gaacgaactt
tRNA gene sequence 
GCCGAAGTGGTGGAACTGGCAGACGCGCTGGACTCAAAATCCAGTGGAGCTCAAACTCCG
TGTGGGTTCGAGTCCCACCTTCGGCACCA
Downstream region at tRNA end position 
ttattatttt
Secondary structure (Cloverleaf model)
>WENV170685959	Leu	CAA
                   t      ACCA ttattatttt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     C A C C C     A
      C A A        G      | | | | |     G
    T       G G T G       G T G G G     C
    G         | + |                 T T
    G       A C G C
      C A G        G     TGGAGCTCAAACTCCGT
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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