The detailed information of tRNA gene sequence


Sequence ID>WENV170686002
Genome IDLFRM01121056
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 5994
End posion on genome 6068
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
aatgcattct
tRNA gene sequence 
GGAACTATAGCTCAGCGGGAGAGCGCTTGCTTGACGTGCAAGATGTCGGGGGTTCAAATC
CCTCTAGTTCCACCA
Downstream region at tRNA end position 
ttttgaaaat
Secondary structure (Cloverleaf model)
>WENV170686002	Val	GAC
                   t      ACCA ttttgaaaat
                     G - C
                     G - C
                     A - T
                     A - T
                     C - G
                     T - A
                     A - T          T A
                    T     C T C C C     A
        G A        A      | + | | |     A
      C     C T C G       G G G G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     ATGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       T
                  T       G
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK