The detailed information of tRNA gene sequence


Sequence ID>WENV170686037
Genome IDLFRM01123193
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 3720
End posion on genome 3795
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ttcaatgtac
tRNA gene sequence 
GCTGGCGTAGCTCAACTGGCAGAGCACCTGATTTGTAATCAGGGGGTTGCGGGTTCAAGT
CCCATCGCCAGCTCCA
Downstream region at tRNA end position 
aaattatgtt
Secondary structure (Cloverleaf model)
>WENV170686037	Thr	TGT
                   c      TCCA aaattatgtt
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T A C C C     A
      C A A        A      +   | | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTT
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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