The detailed information of tRNA gene sequence


Sequence ID>WENV170686038
Genome IDLFRM01123193
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 3871
End posion on genome 3955
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
caagctctgt
tRNA gene sequence 
GGAGGGGTTCCCGAGCGGCCAAAGGGAACAGACTGTAAATCTGTCGGCGGAGCCTTCGGA
GGTTCGAATCCTCCCCCCTCCACCA
Downstream region at tRNA end position 
tnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170686038	Tyr	GTA
                   t      ACCA tnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C T C C     A
      C G A        T      | | | | |     G
    G       G C C C       G G A G G     C
    G         | | |                 T T
    C       A G G G
      C A A        A     CGGCGGAGCCTTC
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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