The detailed information of tRNA gene sequence


Sequence ID>WENV170686045
Genome IDLFRM01123344
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 594
End posion on genome 523
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
agggtaacag
tRNA gene sequence 
GGGCCGATAGATCAGGGGGAGATCGCTACCTTGGCATGGTAGAGGCCGCGGGTTCAAATC
CCGCTCGGTCCAtgt
Downstream region at tRNA end position 
ttgctgttct
Secondary structure (Cloverleaf model)
>WENV170686045	Ala	GGC
                   g      Atgt ttgctgttct
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     A - T          T A
                    T     C G C C C     A
        G A        A      | | | | |     A
      G     C T A G       G C G G G     C
      G     | | | |                 T T
      G     G A T C
        G A        G     AGGCC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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