The detailed information of tRNA gene sequence


Sequence ID>WENV170686064
Genome IDLFRM01124206
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 70
End posion on genome 143
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
actgcagtgt
tRNA gene sequence 
GGCGACGTCGCCAAGTGGTAAGGCAGAGGCCTGCAAAGCCTTTATCAGCGGTTCGAATCC
GCTCGTCGCCTCCA
Downstream region at tRNA end position 
gatatccatt
Secondary structure (Cloverleaf model)
>WENV170686064	Cys	GCA
                   t      TCCA gatatccatt
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T C G C C     A
        G A        C      | | | | |     G
      T     A C C G       A G C G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATC
                    G + T
                    A - T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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