The detailed information of tRNA gene sequence


Sequence ID>WENV170686067
Genome IDLFRM01124519
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 87
End posion on genome 160
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
aatacaatat
tRNA gene sequence 
GCGGGTGTAGCTCAATGGTAGAGTTCCGGCCTTCCAAGCCGGCTGTGAGGGTTCGATCCC
CTTCACCCGCTCCA
Downstream region at tRNA end position 
aataaagatt
Secondary structure (Cloverleaf model)
>WENV170686067	Gly	TCC
                   t      TCCA aataaagatt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          C T
                    T     T T C C C     A
        A A        A      + | | | |     G
      T     C T C G       G A G G G     C
      G     | | | +                 T T
      G     G A G T
        T A        T     CTGT
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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