The detailed information of tRNA gene sequence


Sequence ID>WENV170686072
Genome IDLFRM01124601
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 712
End posion on genome 637
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
cggcgaccac
tRNA gene sequence 
GCCGCCTTAGCTCAGTCGGTAGAGCGCTTCACTCGTAATGAAAAGGTCGCGAGTTCGATT
CTCGCAGGCGGCTCCG
Downstream region at tRNA end position 
ccaaaacccc
Secondary structure (Cloverleaf model)
>WENV170686072	Thr	CGT
                   c      TCCG ccaaaacccc
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A          T T
                    T     C G C T C     A
      T G A        A      | | | | |     G
    C       C T C G       G C G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C   A
                    T - A
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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