The detailed information of tRNA gene sequence


Sequence ID>WENV170686091
Genome IDLFRM01125695
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 291
End posion on genome 218
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
cgaaagatcc
tRNA gene sequence 
GCGGGTGTAGCACAATGGTAGTGCAACAGCCTTCCAAGCTGATGACGAGGGTTCGATTCC
CTTCACCCGCTCCA
Downstream region at tRNA end position 
gacttgccgg
Secondary structure (Cloverleaf model)
>WENV170686091	Gly	TCC
                   c      TCCA gacttgccgg
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     T T C C C     A
        A A        A      + | | | |     G
      T     C A C G       G A G G G     C
      G     | | | |                 T T
      G     G T G C
        T A        A     TGAC
                    A   A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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