The detailed information of tRNA gene sequence


Sequence ID>WENV170686111
Genome IDLFRM01126722
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 852
End posion on genome 776
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gcaccaaagt
tRNA gene sequence 
CGGGAAGTGGCTCAGCCTGGTAGAGCACAGCGTTCGGGACGCTGGGGTCGGAGGTTCGAA
TCCTCTCTTCCCGACCA
Downstream region at tRNA end position 
tgagaaaagc
Secondary structure (Cloverleaf model)
>WENV170686111	Pro	CGG
                   t      ACCA tgagaaaagc
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     T C T C C     A
      C G A        G      + | | | |     G
    C       C T C G       G G A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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