The detailed information of tRNA gene sequence


Sequence ID>WENV170686125
Genome IDLFRM01127509
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1334
End posion on genome 1260
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGCCCATTCGTCTATCGGTTAGGACGCCAGATTTTCATTCTGGAAAGAGGGGTTCGATTC
CCCTATGGGCTACCA
Downstream region at tRNA end position 
attaaataca
Secondary structure (Cloverleaf model)
>WENV170686125	Glu	TTC
                   n      ACCA attaaataca
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A          T T
                    T     T C C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAG
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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