The detailed information of tRNA gene sequence


Sequence ID>WENV170686136
Genome IDLFRM01128167
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 562
End posion on genome 487
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
tttggttggg
tRNA gene sequence 
GGGTCGTTAACTCAGCCGGTAGAGTATCTGCCTTTTAAGCAGAGAGTCGCGCGTTCGAGT
CGCGCACGACCCACCA
Downstream region at tRNA end position 
tgagcatttg
Secondary structure (Cloverleaf model)
>WENV170686136	Lys	TTT
                   g      ACCA tgagcatttg
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     T - A          T G
                    T     C G C G C     A
      C G A        A      | | | | |     G
    C       C T C A       G C G C G     C
    G       | | | |                 T T
    G       G A G T
      T A          A     GAGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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