The detailed information of tRNA gene sequence


Sequence ID>WENV170686150
Genome IDLFRM01129284
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 335
End posion on genome 261
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
tcgcaagcga
tRNA gene sequence 
GGGCGATTGGCGCAGCGGTAGCGCGCTTCCCTGACACGGAAGAGGTCACTGGTTCGATCC
CAGTATCGCCCACCA
Downstream region at tRNA end position 
gcaaggcccc
Secondary structure (Cloverleaf model)
>WENV170686150	Val	GAC
                   a      ACCA gcaaggcccc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          C T
                    T     T G A C C     A
        G A        G      | | | | |     G
      C     C G C G       A C T G G     C
      G     | | | |                 T T
      G     G C G C
        T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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