The detailed information of tRNA gene sequence


Sequence ID>WENV170686166
Genome IDLFRM01129613
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 16750
End posion on genome 16676
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
taatcattgt
tRNA gene sequence 
GCTCATATGGCTCAGAGGTAGAGCACTTCCTTGGTAAGGAAGAGGTCGTGGGTTCAAGTC
CCACTATGAGCTCCA
Downstream region at tRNA end position 
ccttaattat
Secondary structure (Cloverleaf model)
>WENV170686166	Thr	GGT
                   t      TCCA ccttaattat
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T
                     T - A
                     A - T          T G
                    T     C A C C C     A
        G A        G      | | | | |     A
      A     C T C G       G T G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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