The detailed information of tRNA gene sequence


Sequence ID>WENV170686183
Genome IDLFRM01130409
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2680
End posion on genome 2604
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
actgaacaat
tRNA gene sequence 
TGGGGAATCGCCAAGTTGGTTAAGGCACTGGATTTTGATTCCAGCATGCGAAGGTTCGAA
TCCTTCTTCCCCAGCCA
Downstream region at tRNA end position 
ctctcaaatc
Secondary structure (Cloverleaf model)
>WENV170686183	Gln	TTG
                   t      GCCA ctctcaaatc
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     C T T C C     A
      T G A        C      | | | | |     G
    T       A C C G       G A A G G     C
    G         | | |                 T T
    G       A G G C
      T T A        A     CATGC
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  T       T
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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