The detailed information of tRNA gene sequence


Sequence ID>WENV170686234
Genome IDLFRM01133544
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 13612
End posion on genome 13686
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
atatatacgt
tRNA gene sequence 
GGCCCATTGGTCAAGCGGTTAAGACATCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTC
CCCTATGGGTCACCA
Downstream region at tRNA end position 
tatagcctgt
Secondary structure (Cloverleaf model)
>WENV170686234	Glu	TTC
                   t      ACCA tatagcctgt
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A          T G
                    T     T C C C C     A
      C G A        G      | | | | |     G
    G       A C T G       A G G G G     C
    G         | | |                 T T
    T       A G A C
      T A          A     TAAC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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