The detailed information of tRNA gene sequence


Sequence ID>WENV170686235
Genome IDLFRM01133544
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 13761
End posion on genome 13837
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tcaaagatat
tRNA gene sequence 
GGCCCGGTAGTTCAGTTGGTTAGAATGCCAGCCTGTCACGCTGGAGGTCGAGGGTTCGAG
CCCCTTCCGGGTCGCCA
Downstream region at tRNA end position 
ttttattaat
Secondary structure (Cloverleaf model)
>WENV170686235	Asp	GTC
                   t      GCCA ttttattaat
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          C G
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G A G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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