The detailed information of tRNA gene sequence


Sequence ID>WENV170686265
Genome IDLFRM01136480
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 4624
End posion on genome 4700
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
taactttagT
tRNA gene sequence 
GGGCCCGTAGCATAGCTGGTGGTGCACCCGGCTGATAACCGGGAGGTCGTGCGTTCGAAT
CGCATCGGGCCCATCA
Downstream region at tRNA end position 
tcttttccgt
Secondary structure (Cloverleaf model)
>WENV170686265	Ile	GAT
                   T      ATCA tcttttccgt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T A C G C     A
      C G A        A      + | | | |     G
    T       T A C G       G T G C G     C
    G       + | | |                 T T
    G       G T G C
      T G          A     AGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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