The detailed information of tRNA gene sequence


Sequence ID>WENV170686266
Genome IDLFRM01136480
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 4899
End posion on genome 4972
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gagtgcattt
tRNA gene sequence 
GGGCCCGTAGCATAGCCGGTGGTGCACCCGGCTGATAACCGGGAGGTCGTGCGTTCGAAT
CGCATCGGGCCCACtg
Downstream region at tRNA end position 
ttctttttca
Secondary structure (Cloverleaf model)
>WENV170686266	Ile	GAT
                   t      ACtg ttctttttca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T A C G C     A
      C G A        A      + | | | |     G
    C       T A C G       G T G C G     C
    G       + | | |                 T T
    G       G T G C
      T G          A     AGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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