The detailed information of tRNA gene sequence


Sequence ID>WENV170686295
Genome IDLFRM01137931
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 752
End posion on genome 828
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctgtatgcgt
tRNA gene sequence 
GGCGGAATAGCTCAGCTGGCTAGAGCATTCGGTTCATACCCGAAGGGTCGTAGGTTCAAG
TCCTATTTCCGCTACCA
Downstream region at tRNA end position 
ttactttttt
Secondary structure (Cloverleaf model)
>WENV170686295	Met	CAT
                   t      ACCA ttactttttt
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T          T G
                    T     T A T C C     A
      C G A        A      + | | | |     A
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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